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JCSG Target List Report Date: Thu 23-Apr-2015 11:45:52
 No.   Target ID   Target Name   Protein Accession   Species   Description   PDB   Active   PCR   Cloned   Expression   Purified   Crystal   Data Set   Structure   PDB 
 1   371986   ME9797A   104161995   uncultured Thermotogales bacterium   predicted HD superfamily hydrolase   PDB  2pq7
 2   367064   FG7480A   NP_636471.1   X. campestris   A zinc-binding protein from cupin superfamily involved in tetracenomycin polyketide synthesis   PDB  3h50
 3   380344   FG7482A   NP_637619.1   X. campestris   Putative General Stress Protein 26 with a PNP-Oxidase like fold   PDB  3dmb
 4   371319   FK5749A   NP_639141.1   X. campestris   haloacid delahogenase-like family hydrolase   PDB  2pke
 5   371737   FK8795C   NP_638301.1   X. campestris   Acetyltransferase [Acyl-CoA N-acyltransferases]   PDB  2ozh
 6   383078   FP4107A   NP_639225.1   X. campestris   Serine hydrolase (alpha/beta hydrolase) [DPP6 catalytic domain-like] with a conserved catalytic triad (S108/D186/H217)   PDB  3ksr
 7   391539   MG14561F   NP_635776.1   X. campestris   Putative polyketide cyclase from Xanthomonas campestris [Cystatin-like]   PDB  3i0y
 8   391540   MG14655B   NP_639274.1   X. campestris   Protein of unknown function with cystatin-like fold.   PDB  3g8z
 9   372467   PG9920A   NP_636912.1   X. campestris   Putative hydrolase of the alpha/beta superfamily [Atu1826-like].   PDB  2qjw
 10   396520   PX11702A   NP_636218.1   X. campestris   Putative calcium/calmodulin dependent protein kinase II association domain   PDB  3h51
 11   380229   GN7729A   JCVI_PEP_1096686650277   Unknown   Protein structurally similar to Sm/LSm-like RNA-binding proteins   PDB  3by7
 12   367476   GN7730A   JCVI_PEP_1096672785533   Unknown   Dimeric ferredoxin-like protein   PDB  2op5
 13   367439   GN7738A   JCVI_PEP_1096665735785   Unknown   dimeric ferredoxin-like protein   PDB  2od4
 14   367491   GN7747A   JCVI_PEP_1096688149193   Unknown   Putative nucleic acid binding protein   PDB  2od5
 15   367441   GN7757A   JCVI_PEP_1096682647733   Unknown   Dimeric ferredoxin-like protein from an environmental metagenome.   PDB  2od6
 16   367457   GN7773A   JCVI_PEP_1096685590403   Unknown   Marine metagenome protein with structure similar to oxygenases   PDB  2pgc
 17   400673   FR14695A   NP_110623.1   T. volcanium   Putative nitrate transport protein [Phosphate binding protein-like]   PDB  3mst
 18   281896   TM0015   TM0015   T. maritima   Pyruvate synthase subunit PORC (EC (Pyruvate oxidoreductase gamma chain) (POR) (Pyruvic-ferredoxin oxidoreductase gamma subunit).   PDB  2raa
 19   281902   TM0021   TM0021   T. maritima   Putative PII-like signaling protein [Ferredoxin-like]   PDB  1o51
 20   281945   TM0064   TM0064   T. maritima   Uronate isomerase (EC (Glucuronate isomerase) (Uronic isomerase).   PDB  1j5s
 21   281947   TM0066   TM0066   T. maritima   2-dehydro-3-deoxyphosphogluconate aldolase (EC / 4-hydroxy-2-oxoglutarate aldolase (EC   PDB  1vlw
 22   281948   TM0067   TM0067   T. maritima   2-dehydro-3- deoxygluconokinase (EC   PDB  2afb
 23   281958   TM0077   TM0077   T. maritima   Putative acetyl xylan esterase.   PDB  3m82
 24   282000   TM0119   TM0119   T. maritima   Acetamidase, putative.   PDB  2f4l
 25   282020   TM0140   TM0140   T. maritima   Indole-3-glycerol phosphate synthase (EC (IGPS).   PDB  1j5t
 26   282039   TM0159   TM0159   T. maritima   Putative Xanthosine triphosphate pyrophosphatase (EC 3.6.1.-)/HAM1 protein homolog [ITPase (Ham1)].   PDB  1vp2
 27   358348   TM0160   TM0160   T. maritima   Putative bifunctional nuclease, DNase-RNase family, PF02577   PDB  1sj5
 28   282040   TM0160   TM0160   T. maritima   Putative bifunctional nuclease, DNase-RNase family, PF02577   PDB  1vjl
 29   282041   TM0161   TM0161   T. maritima   Geranyltranstransferase (EC   PDB  2ftz
 30   282046   TM0166   TM0166   T. maritima   Dihydrofolate synthase (EC / Folylpolyglutamate synthase (EC   PDB  1o5z
 31   282055   TM0175   TM0175   T. maritima   Acyl carrier protein (ACP).   PDB  1vku
 32   358402   TM0189   TM0189   T. maritima   Putative periplasmic Fe(III) ABC transporter.   PDB  2etv
 33   282087   TM0207   TM0207   T. maritima   Putative Zn-dependent hydrolase of the metallo-beta-lactamase superfamily [Metallo-hydrolase/oxidoreductase]   PDB  1vjn
 34   282092   TM0212   TM0212   T. maritima   Putative glycine cleavage system H protein   PDB  1zko
 35   282095   TM0215   TM0215   T. maritima   Putative endoribonuclease [YjgF/L-PSP]   PDB  2b33
 36   282096   TM0216   TM0216   T. maritima   Glycyl-tRNA synthetase alpha chain (EC   PDB  1j5w
 37   282110   TM0231   TM0231   T. maritima   UDP-N-acetylmuramate--L-alanine ligase MurC (EC (UDP-N- acetylmuramoyl-L-alanine synthetase).   PDB  1j6u
 38   358404   TM0246   TM0246   T. maritima   Putative RnfG subunit of electron transport complex.   PDB  3dcz
 39   282139   TM0262   TM0262   T. maritima   DNA polymerase III, beta subunit.   PDB  1vpk
 40   282146   TM0269   TM0269   T. maritima   Activation (AdoMet binding) domain of Methionine synthase (EC   PDB  1j6r
 41   282169   TM0293   TM0293   T. maritima   Gamma-glutamyl phosphate reductase (GPR) (EC (Glutamate-5- semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase).   PDB  1o20
 42   282171   TM0295   TM0295   T. maritima   Transaldolase (EC   PDB  1vpx
 43   282188   TM0312   TM0312   T. maritima   Oxidoreductase (EC 1.1.1.-)   PDB  1zh8
 44   282196   TM0320   TM0320   T. maritima   Heavy metal binding protein.   PDB  2kyz
 45   282207   TM0332   TM0332   T. maritima   Orotidine 5'-phosphate decarboxylase (EC (OMP decarboxylase) (OMPDCase) (OMPdecase).   PDB  1vqt
 46   282218   TM0343   TM0343   T. maritima   Phospho-2-dehydro-3-deoxyheptonate aldolase (EC (DAHP synthase)   PDB  1vr6
 47   354146   TM0378   TM0378   T. maritima   glycerol-3-phosphate dehydrogenase   PDB  1z82
 48   282288   TM0415   TM0415   T. maritima   Carbohydrate kinase, PfkB family   PDB  1vk4
 49   282296   TM0423   TM0423   T. maritima   Glycerol dehydrogenase.   PDB  1kq3
 50   282309   TM0436   TM0436   T. maritima   Alcohol dehydrogenase, zinc-containing.   PDB  1vj0
 51   359776   TM0441   TM0441   T. maritima   Gluconate 5-dehydrogenase (EC   PDB  1vl8
 52   282319   TM0446   TM0446   T. maritima   Phosphoribosylaminoimidazole mutase catalytic subunit (EC (AIR carboxylase) (AIRC).   PDB  1o4v
 53   282322   TM0449   TM0449   T. maritima   Thy1-Complementing Protein Thymidylate synthase thyX (EC 2.1.1.) (TS) (TSase).   PDB  1kq4
 54   282359   TM0486   TM0486   T. maritima   TM0486 (DUF77 family) thiamin-binding protein [MTH1187-like].   PDB  1vk8
 55   282360   TM0487   TM0487   T. maritima   Conserved PaaD-like protein of unknown function; possibly involved with Fe-S cluster metabolism.   PDB  1wcj
 56   282361   TM0488   TM0488   T. maritima   N5-glutamine methyltransferase, HemK(EC 2.1.1.-)   PDB  1vq1
 57   282365   TM0492   TM0492   T. maritima   Tryptophanyl-tRNA synthetase (EC (Tryptophan--tRNA ligase) (TrpRS).   PDB  2g36
 58   359753   TM0511   TM0511   T. maritima   Uracil-DNA glycosylase (EC 3.2.2.-)   PDB  1vk2
 59   282415   TM0542   TM0542   T. maritima   NAD-dependent malic enzyme (EC   PDB  1vl6
 60   282417   TM0544   TM0544   T. maritima   ABC transporter ATP-binding protein.   PDB  1vpl
 61   282429   TM0556   TM0556   T. maritima   3-isopropylmalate dehydrogenase (EC (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH).   PDB  1vlc
 62   282432   TM0559   TM0559   T. maritima   Predicted metal-dependent phosphoesterase (PHP family)   PDB  2anu
 63   282434   TM0561   TM0561   T. maritima   Magnesium Mg(2+)/cobalt Co(2+) transport protein.   PDB  2iub
 64   282443   TM0570   TM0570   T. maritima   Cell division protein ftsY.   PDB  1vma
 65   282447   TM0574   TM0574   T. maritima   S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) (Queuosine biosynthesis protein queA).   PDB  1vky
 66   282454   TM0581   TM0581   T. maritima   Putative thioesterase TM0581.   PDB  2q78
 67   282476   TM0603   TM0603   T. maritima   30S ribosomal protein S6.   PDB  1vmb
 68   282477   TM0604   TM0604   T. maritima   Single stranded DNA-binding protein.   PDB  1z9f
 69   282486   TM0613   TM0613   T. maritima   Nucleotide binding domain (HEPN) of the two-protein nucleotidyl transferase complex   PDB  1o3u
 70   282527   TM0655   TM0655   T. maritima   S-adenosylmethionine decarboxylase proenzyme (EC (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase beta chain; S- adenosylmethionine decarboxylase alpha chain].   PDB  1vr7
 71   282530   TM0658   TM0658   T. maritima   Putative superoxide reductase [Superoxide reductase-like]   PDB  3qzb
 72   282537   TM0665   TM0665   T. maritima   O-acetylserine sulfhydrylase   PDB  1j6n
 73   282539   TM0667   TM0667   T. maritima   TatD-related deoxyribonuclease   PDB  1j6o
 74   356088   TM0680   TM0680   T. maritima   the C-terminal fragment of the putative flagellar motor switch protein FliN   PDB  1o6a
 75   360368   TM0693   TM0693   T. maritima   Putative RNA binding protein.   PDB  2g42
 76   282586   TM0716   TM0716   T. maritima   Acetyl-coenzyme A carboxyl transferase (EC / Propionyl-coenzyme A carboxyl transferase (EC / Biotin:Acyl-CoA transcarboxylase chain   PDB  1vrg
 77   282591   TM0721   TM0721   T. maritima   Uracil phosphoribosyltransferase (EC (UMP pyrophosphorylase) (UPRTase).   PDB  1o5o
 78   282593   TM0723   TM0723   T. maritima   Putative thiamin phosphate synthase   PDB  1vmj
 79   282597   TM0727   TM0727   T. maritima   Putative modulator of DNA gyrases [Putative modulator of DNA gyrase, PmbA/TldD]   PDB  1vl4
 80   359843   TM0741   TM0741   T. maritima   Phosphopantetheine adenylyltransferase (EC (Pantetheine- phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase).   PDB  1vlh
 81   282618   TM0748   TM0748   T. maritima   SAM-dependent O-methyltransferase   PDB  1o54
 82   282622   TM0752   TM0752   T. maritima   alpha-glucuronidase (EC   PDB  1vjt
 83   282625   TM0755   TM0755   T. maritima   Flavoprotein   PDB  1vme
 84   360384   TM0771   TM0771   T. maritima   DNA polymerase III, gamma subunit-related protein.   PDB  2gno
 85   282666   TM0796   TM0796   T. maritima   Putative nucleotide binding protein   PDB  2g0t
 86   282670   TM0800   TM0800   T. maritima   putative nitroalkan dioxygenase   PDB  3bo9
 87   282683   TM0813   TM0813   T. maritima   Glucosamine-6-phosphate deaminase (EC   PDB  1j5x
 88   282684   TM0814   TM0814   T. maritima   N-acetylglucosamine-6-phosphate deacetylase.   PDB  1o12
 89   282686   TM0816   TM0816   T. maritima   Putative transcriptional regulator from the MarR family   PDB  2eth
 90   282690   TM0820   TM0820   T. maritima   NADH-dependent butanol dehydrogenase A (EC 1.1.1.-)   PDB  1vlj
 91   282698   TM0828   TM0828   T. maritima   Possible 1-phosphofructokinase (EC   PDB  1o14
 92   282701   TM0831   TM0831   T. maritima   Probable branched-chain amino acid aminotransferase (EC (BCAT).   PDB  3csw
 93   282725   TM0855   TM0855   T. maritima   Ribosome-binding factor A.   PDB  2kzf
 94   282743   TM0874   TM0874   T. maritima   Glycoprotein endopeptidase   PDB  2a6a
 95   282744   TM0875   TM0875   T. maritima   An orphan protein with a new fold from Thermotoga maritima.   PDB  1o22
 96   359866   TM0881   TM0881   T. maritima   Homoserine O-succinyltransferase (EC (Homoserine O- transsuccinylase) (HTS).   PDB  2h2w
 97   282761   TM0892   TM0892   T. maritima   CBS domain protein/ACT domain protein [CBS-domain pair]   PDB  1vr9
 98   359759   TM0894   TM0894   T. maritima   putative metallo-beta-lactamase   PDB  1ztc
 99   282784   TM0915   TM0915   T. maritima   Ribonuclease HII (EC (RNase HII).   PDB  2etj
 100   282788   TM0919   TM0919   T. maritima   Hydroperoxide resistance protein OsmC   PDB  1vla
 101   375013   TM0920   TM0920   T. maritima   Alcohol dehydrogenase, iron-containing.   PDB  1o2d
 102   282791   TM0922   TM0922   T. maritima   Putative carbohydrate kinase   PDB  2ax3
 103   282804   TM0935   TM0935   T. maritima   CBS domain-containing protein [CBS-domain pair]   PDB  1o50
 104   282805   TM0936   TM0936   T. maritima   Metal-dependent hydrolase of cytosinedemaniase/chlorohydrolase family.   PDB  1j6p
 105   358444   TM0957   TM0957   T. maritima   OB-fold protein   PDB  2f4i
 106   282829   TM0960   TM0960   T. maritima   Ribokinase.   PDB  1vm7
 107   358514   TM0961   TM0961   T. maritima   LEMA protein [Bromodomain-like]   PDB  2etd
 108   282848   TM0979   TM0979   T. maritima   Putative sulfur transferase   PDB  1rhx
 109   282876   TM1009   TM1009   T. maritima   2,5-diketo-D-gluconic acid reductase (EC   PDB  1vp5
 110   282877   TM1010   TM1010   T. maritima   cupin-like protein [Double-stranded beta-helix]   PDB  2f4p
 111   282879   TM1012   TM1012   T. maritima   Putative nucleotidyltransferase [TM1012-like]   PDB  2ewr
 112   282897   TM1030   TM1030   T. maritima   Transcriptional regulator, TETR family.   PDB  1zkg
 113   282903   TM1036   TM1036   T. maritima   Imidazole glycerol phosphate synthase subunit hisF (EC 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF).   PDB  2a0n
 114   359801   TM1040   TM1040   T. maritima   Histidinol-phosphate aminotransferase (EC (Imidazole acetol- phosphate transferase).   PDB  2f8j
 115   282916   TM1049   TM1049   T. maritima   Endoglucanase.   PDB  2fvg
 116   282917   TM1050   TM1050   T. maritima   Endoglucanase.   PDB  3isx
 117   282923   TM1056   TM1056   T. maritima   Periplasmic divalent cation tolerance protein.   PDB  1o5j
 118   282947   TM1080   TM1080   T. maritima   Ribose 5-phosphate isomerase RpiB(EC   PDB  1o1x
 119   282948   TM1081   TM1081   T. maritima   Putative anti-sigma factor antagonist TM1081 [SpoIIaa-like]   PDB  3f43
 120   282950   TM1083   TM1083   T. maritima   Archease, possible chaperone from DUF101 group   PDB  1j5u
 121   358957   TM1088A   TM1088A   T. maritima   Putative transport protein. N-terminal domain of TrkA protein from NAD(P)-binding Rossmann-domain fold. Possibily involved in potassium or calcium uptake.   PDB  2g1u
 122   358959   TM1088A:TM1088B   TM1088A   T. maritima   Putative transport protein. N-terminal domain of TrkA protein from NAD(P)-binding Rossmann-domain fold. Possibily involved in potassium or calcium uptake.   PDB  3l4b
 123   406264   TM1088B   TM1088B   T. maritima   Putative transport protein, part of the K+ channel [TrkA C-terminal domain-like]   PDB  3jxo
 124   358959   TM1088B:TM1088A   TM1088B   T. maritima   Putative transport protein, part of the K+ channel [TrkA C-terminal domain-like]   PDB  3l4b
 125   282963   TM1097   TM1097   T. maritima   Ornithine carbamoyltransferase (EC (OTCase).   PDB  1vlv
 126   282968   TM1102   TM1102   T. maritima   Ribonuclease III (EC (RNase III).   PDB  1o0w
 127   282978   TM1112   TM1112   T. maritima   Novel Thermotoga maritima protein from the DUF861 family and cupin fold.   PDB  2k9z
 128   282994   TM1128   TM1128   T. maritima   Ferritin.   PDB  1vlg
 129   282997   TM1131   TM1131   T. maritima   Aminotransferase, putative.   PDB  1vp4
 130   420134   TM1135   TM1135   T. maritima   Leucine specific ABC transporter, periplasmic binding protein LivK   PDB  3td9
 131   283020   TM1154   TM1154   T. maritima   6-phosphogluconolactonase (EC (6PGL).   PDB  1vl1
 132   283024   TM1158   TM1158   T. maritima   putative glutamine amido transferase [Flavodoxin-like]   PDB  1o1y
 133   283034   TM1169   TM1169   T. maritima   3-oxoacyl-(acyl carrier protein) reductase.   PDB  1o5i
 134   283036   TM1171   TM1171   T. maritima   Transcriptional regulator, CrP family.   PDB  1o5l
 135   283050   TM1185   TM1185   T. maritima   Methylglyoxal synthase (EC (MGS).   PDB  1vmd
 136   359818   TM1192   TM1192   T. maritima   Alpha-galactosidase (EC (Melibiase).   PDB  1zy9
 137   358463   TM1223   TM1223   T. maritima   Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein.   PDB  1vr5
 138   359804   TM1224   TM1224   T. maritima   N-acetylglucosamine kinase (EC / predicted N-acetylglucosamine repressor   PDB  2hoe
 139   283090   TM1225   TM1225   T. maritima   Predicted glycosidase   PDB  1vkd
 140   283109   TM1244   TM1244   T. maritima   Phosphoribosylformylglycinamidine synthase, purS subunit (EC   PDB  1vq3
 141   283111   TM1246   TM1246   T. maritima   Phosphoribosylformylglycinamidine synthase II (EC (FGAM synthase II).   PDB  1vk3
 142   360132   TM1249   TM1249   T. maritima   Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC / IMP cyclohydrolase (EC   PDB  1zcz
 143   359807   TM1250   TM1250   T. maritima   Phosphoribosylamine--glycine ligase (EC (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase).   PDB  1vkz
 144   283120   TM1255   TM1255   T. maritima   Aspartate aminotransferase (EC (Transaminase A) (AspAT).   PDB  1o4s
 145   283137   TM1272   TM1272   T. maritima   Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-) (Glu-ADT subunit A).   PDB  2gi3
 146   283151   TM1287   TM1287   T. maritima   putative oxalate decarboxylase (EC ) [double-stranded beta-helix]   PDB  1o4t
 147   283154   TM1290   TM1290   T. maritima   Putative NifB protein from DUF35 family , involved in FeMo-Co biosynthesis [Ribonuclease H-like motif]   PDB  1rdu
 148   283157   TM1293   TM1293   T. maritima   SAM-dependent methyltransferase, possible histamine N-methyltransferase   PDB  1vlm
 149   283208   TM1347   TM1347   T. maritima   Inosine-5'-monophosphate dehydrogenase.   PDB  1vrd
 150   283212   TM1351   TM1351   T. maritima   Glutamyl-tRNA synthetase 1 (EC (Glutamate--tRNA ligase 1) (GluRS 1).   PDB  2o5r
 151   283228   TM1367   TM1367   T. maritima   Protein from DUF369 with an atypical cyclophilin (peptidylprolyl isomerase) fold. Putative peptidylprolyl cis-trans isomerase.   PDB  2ka0
 152   359772   TM1380   TM1380   T. maritima   predicted RNA methyltransferase [alpha/beta knot]   PDB  1z85
 153   283246   TM1385   TM1385   T. maritima   Glucose-6-phosphate isomerase (EC (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI).   PDB  2q8n
 154   283248   TM1387   TM1387   T. maritima   Dephospho-CoA kinase (EC (Dephosphocoenzyme A kinase).   PDB  2grj
 155   283250   TM1389   TM1389   T. maritima   Ubiquinone/menaquinone biosynthesis methyltransferase-related protein.   PDB  2avn
 156   283254   TM1393   TM1393   T. maritima   2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC  PDB  1vpa
 157   283255   TM1394   TM1394   T. maritima   33 kDa chaperonin (Heat shock protein 33 homolog) (HSP33).   PDB  1vq0
 158   283264   TM1403   TM1403   T. maritima   ABC transporter ATP-binding protein, PF00005 family protein, P-loop containing nucleoside triphosphate hydrolases fold   PDB  4yer
 159   358470   TM1410   TM1410   T. maritima   Putative glycosidase with a TIM-barrel fold.   PDB  2aam
 160   283279   TM1419   TM1419   T. maritima   Myo-inositol-1-phosphate synthase-related protein   PDB  1vjp
 161   283296   TM1436   TM1436   T. maritima   Glycerol uptake operon antiterminator-related protein.   PDB  1vkf
 162   283301   TM1442   TM1442   T. maritima   Putative anti sigma factor antagonist in its phosphorylated state [SpoIIaa-like]   PDB  1t6r
 163   283317   TM1459   TM1459   T. maritima   Novel family of manganese-containing cupin   PDB  1o5n
 164   283322   TM1464   TM1464   T. maritima   indigoidine synthase A (IdgA)-like protein, possibly involved in carbohydrate metabolism [Indigoidine synthase A-like]   PDB  1vkm
 165   283326   TM1468   TM1468   T. maritima   Putative lipid binding protein, from the DegV family [DAK1/DegV-like]   PDB  1vpv
 166   283335   TM1478   TM1478   T. maritima   Methionine aminopeptidase (EC (MAP) (Peptidase M).   PDB  1o0x
 167   283349   TM1492   TM1492   T. maritima   50S ribosomal protein L29.   PDB  1r73
 168   283363   TM1506   TM1506   T. maritima   ADP-ribosylated protein with unknown function   PDB  1vk9
 169   283377   TM1520   TM1520   T. maritima   Dihydrodipicolinate reductase (EC (DHPR).   PDB  1vm6
 170   283378   TM1521   TM1521   T. maritima   Dihydrodipicolinate synthase (EC (DHDPS).   PDB  1o5k
 171   283383   TM1526   TM1526   T. maritima   Putative ferritin-like diiron-carboxylate protein   PDB  1vjx
 172   358474   TM1553   TM1553   T. maritima   ApbE protein involved in thiamine biosynthesis   PDB  1vrm
 173   283416   TM1559   TM1559   T. maritima   Deoxyribose-phosphate aldolase (EC (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA).   PDB  1o0y
 174   283417   TM1560   TM1560   T. maritima   Formiminotetrahydrofolate cyclodeaminase (EC   PDB  1o5h
 175   283418   TM1561   TM1561   T. maritima   Queuine tRNA-ribosyltransferase (EC (tRNA-guanine transglycosylase) (Guanine insertion enzyme).   PDB  2ash
 176   283442   TM1585   TM1585   T. maritima   Glycerate kinase (EC   PDB  1o0u
 177   359768   TM1586   TM1586   T. maritima   Putative Nitroreductase (EC 1.-.-.-)   PDB  1vkw
 178   283453   TM1596   TM1596   T. maritima   Purine nucleoside phosphorylase.   PDB  1vmk
 179   283459   TM1602   TM1602   T. maritima   Transcriptional regulator, biotin repressor family.   PDB  1j5y
 180   283469   TM1612   TM1612   T. maritima   ATP synthase alpha chain (EC   PDB  2r9v
 181   359877   TM1620   TM1620   T. maritima   Carboxymuconolactone decarboxylase family protein possibly involved in antioxidative response   PDB  1vke
 182   283478   TM1621   TM1621   T. maritima   Glycerophosphodiester phosphodiesterase (GDPD) (TM1621).   PDB  1o1z
 183   358480   TM1622   TM1622   T. maritima   GTP binding regulator   PDB  1vr8
 184   283488   TM1631   TM1631   T. maritima   Putative DNA-acting enzyme (DUF72 family)   PDB  1vpq
 185   372975   TM1635   TM1635   T. maritima   the first eubacterial Mre11 nuclease   PDB  2q8u
 186   283500   TM1643   TM1643   T. maritima   Aspartate dehydrogenase [same functional role as] (EC   PDB  1j5p
 187   283502   TM1645   TM1645   T. maritima   type II quinolic acid phosphoribosyltransferase [decarboxylating] (EC   PDB  1o4u
 188   283518   TM1661   TM1661   T. maritima   Peptide deformylase (EC (PDF) (Polypeptide deformylase).   PDB  1lme
 189   283555   TM1698   TM1698   T. maritima   Aspartate aminotransferase.   PDB  2gb3
 190   283594   TM1739   TM1739   T. maritima   Putative nuclease with a ribonuclease H-like motif fold [TM1739-like].   PDB  1zup
 191   283597   TM1742   TM1742   T. maritima   4-nitrophenylphosphatase (EC   PDB  1vjr
 192   283599   TM1744   TM1744   T. maritima   L-ALLO-threonine aldolase.   PDB  2fm1
 193   359798   TM1752   TM1752   T. maritima   Endoglucanase.   PDB  1vjz
 194   283620   TM1766   TM1766   T. maritima   Putative Formyltetrahydrofolate Synthetase   PDB  3do6
 195   283634   TM1780   TM1780   T. maritima   Argininosuccinate synthase (EC (Citrulline--aspartate ligase).   PDB  1vl2
 196   283635   TM1782   TM1782   T. maritima   N-acetyl-gamma-glutamyl-phosphate reductase (EC (AGPR) (N- acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase).   PDB  1vkn
 197   283638   TM1785   TM1785   T. maritima   Acetylornithine aminotransferase (EC (ACOAT).   PDB  2ord
 198   283669   TM1816   TM1816   T. maritima   Putative dinitrogenase iron-molybdenum cofactor [Ribonuclease H-like motif]   PDB  1o13
 199   283681   TM1828   TM1828   T. maritima   Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC / 5-amino-6- (5-phosphoribosylamino)uracil reductase (EC   PDB  2hxv
 200   387095   EK2269L   TFUS_04MAR05_CONTIG93_REVISED_GENE318   T. fusca YX-ER1   Putative fructosamine-3-kinase.   PDB  3f7w
 201   371241   FK9593A   YP_290423.1   T. fusca YX-ER1   The putative thioesterase II is homologous to thioesterase II from E. coli (1c8u) [Thioesterase/thiol ester dehydrase-isomerase]   PDB  3bbj
 202   378307   FM11991A   YP_288824.1   T. fusca YX-ER1   Dimeric ferredoxin-like protein of unknown function [ferredoxin-like]   PDB  3bgu
 203   390257   FP2858A   TFUS_04MAR05_CONTIG93_REVISED_GENE761   T. fusca YX-ER1   Putative transcriptional regulator of the TetR/AcrR family is similar to C-terminal region (inducing compounds-binding) of QacR.   PDB  3dcf
 204   372019   PC00329C   YP_290749.1   T. fusca YX-ER1   NADH dehydrogenase subunit C [Nqo5-like]   PDB  3mcr
 205   361176   PC04686E   YP_290167.1   T. fusca YX-ER1   SsgA-like sporulation-specific cell division [alpha+beta class]   PDB  3cm1
 206   375255   PJ04672A   YP_290923.1   T. fusca YX-ER1   Putative methyltransferase   PDB  2qe6
 207   423184   SF20744C   TFUS_04MAR05_CONTIG93_REVISED_GENE2109   T. fusca YX-ER1   Putative cell division protein FtsZ, cell division protein, tubulin homolog, GTP-binding, cell cycle, two domains protein: Tubulin/FtsZ family domain and FtsZ family, C-terminal domain   PDB  4e6e
 208   396994   MG11810B   YP_315894.1   T. denitrificans ATCC 25259   Putative calcium/calmodulin-dependent protein   PDB  3gwr
 209   381882   10640157   10640157   T. acidophilum   Putative ribokinase.     3bf5
 210   359680   10640715   10640715   T. acidophilum   Putative FMN-binding protein     2fur
 211   370499   FJ8835A   NP_393673.1   T. acidophilum   Putative osmotically inducible protein C   PDB  2onf
 212   376023   FL10679A   NP_394282.1   T. acidophilum   putative acetyltransferase   PDB  3c26
 213   376464   FL11316A   NP_394501.1   T. acidophilum   Putative iron-molybdenum cofactor (FeMo-co) of dinitrogenase   PDB  2re2
 214   388819   FL4049A   NP_393672.1   T. acidophilum   Predicted CIB-like hydrolase   PDB  3bdi
 215   380082   FN0547A   NP_394635.1   T. acidophilum   Putative dehydrogenase   PDB  3ing
 216   382454   FP10738A   NP_393992.1   T. acidophilum   Geranylgeranyl bacteriochlorophyll reductase-like.   PDB  3oz2
 217   356213   NP_394403.1   NP_394403.1   T. acidophilum   GMP synthase from a family of class I glutamine amidotransferases (GAT) (class I glutamine amidotransferase-like superfamily)   PDB  2a9v
 218   361192   PC02663D   10640422   T. acidophilum   Putative subunit E of formylmethanofuran dehydrogenase (FmdE/GAPDH domain-like fold)     2gvi
 219   368396   PE00037E   YP_400729.1   Synechococcus sp. PCC 7942 (elongatus)   cupin-like fold   PDB  2nvn
 220   368393   PE00042D   YP_399305.1   Synechococcus sp. PCC 7942 (elongatus)   NMR structure of DUF1823 family protein, PF08853   PDB  2l1n
 221   369221   CM5490D   YP_614459.1   Silicibacter sp. TM1040   uncharacterized peroxidase-related protein   PDB  2pfx
 222   387075   EK8604E   YP_614837.1   Silicibacter sp. TM1040   Putative aminoglycoside phosphotransferase (protein kinase-like fold)   PDB  3csv
 223   371276   FK9370B   YP_614486.1   Silicibacter sp. TM1040   Putative thioesterase [Alpha/beta-Hydrolases]   PDB  2pbl
 224   376409   FL11268A   YP_613385.1   Silicibacter sp. TM1040   Putative thioesterase [hot dog-like fold]   PDB  2qwz
 225   377806   FM11526A   YP_612389.1   Silicibacter sp. TM1040   Biotin protein ligase-like protein (YP_612389.1) is unlikely to have the same function as structurally similar proteins: 2eay, 1wnl, and 1bia.   PDB  3bfm
 226   377904   FM11607A   YP_612366.1   Silicibacter sp. TM1040   putative fructose transport system kinase   PDB  3c8u
 227   383406   FP8022C   YP_612324.1   Silicibacter sp. TM1040   DUF1989 family protein, PF09347, concanavalin A-like lectins/glucanases fold   PDB  3oru
 228   375176   HP10622L   YP_614688.1   Silicibacter sp. TM1040   succinylglutamate desuccinalase   PDB  3na6
 229   391384   MG14561D   YP_611791.1   Silicibacter sp. TM1040   Putative polyketide cyclase. Analysis of genomic neighborhood and phylogenetic profiles indicate that this protein may be functionally associated with nitrilases that break carbon-nitrogen bonds.   PDB  3f8h
 230   391382   MG14585B   YP_614685.1   Silicibacter sp. TM1040   Putative PLP-dependent aminotransferase.   PDB  3fcr
 231   394535   MH10810A   YP_611885.1   Silicibacter sp. TM1040   TenA family transcription regulator [TENA/THI-4]   PDB  3mvu
 232   397279   MI15740X   YP_611455.1   Silicibacter sp. TM1040   Putative aromatic-ring hydroxylating dioxygenase [with two scop folds: ISP domain & Ring hydroxylating alpha subunit catalytic domain]   PDB  3n0q
 233   398828   MI15778A   YP_611946.1   Silicibacter sp. TM1040   Putative ICLR transcriptional regulator   PDB  3r4k
 234   371681   FK9665C   YP_001095880.1   Shewanella sp. PV-4   Thioesterase superfamily protein   PDB  2prx
 235   377869   FM11578A   YP_001094981.1   Shewanella sp. PV-4   DJ-1/PfpI-like protein without a conserved catalytic triad.   PDB  3bhn
 236   378300   FM11984A   YP_001095275.1   Shewanella sp. PV-4   putative monooxygenase   PDB  2ril
 237   379941   FN9673C   YP_001095692.1   Shewanella sp. PV-4   Transcriptional regulator, tetR family [Tetracyclin repressor-like, N-terminal domain]   PDB  3gzi
 238   394125   MH11753F   YP_001095400.1   Shewanella sp. PV-4   CheC-like protein   PDB  3iic
 239   394242   MH7306G   YP_001092907.1   Shewanella sp. PV-4   Putative riboflavin biosynthesis protein   PDB  3ky8
 240   399313   MI9673BF   YP_001095229.1   Shewanella sp. PV-4   Putative tetR family transcription regulator   PDB  3ppb
 241   361143   PC07369B   YP_001095851.1   Shewanella sp. PV-4   Protein of unknown function from the DUF1488 family with a new fold and possibly involved in signaling through interaction with a phosphorylated ligand.   PDB  2gpi
 242   380289   PC08000B   YP_001092950.1   Shewanella sp. PV-4   Protein of Unknown Function (DUF1696) with Pleckstrin-homology Domains   PDB  3dcx
 243   372337   PG9822C   YP_001095227.1   Shewanella sp. PV-4   DUF3478 protein with a SpoIIaa-like fold. Possibly involved in signalling.   PDB  2q3l
 244   374407   PJ06155C   YP_001092504.1   Shewanella sp. PV-4    DUF971 family protein   PDB  2l6n
 245   406214   TT6839B   YP_001093860.1   Shewanella sp. PV-4   Protein with unknown function which belongs to Pfam DUF1425 family.   PDB  3o0l
 246   391773   29837497   29837497   SARS-Tor2   SARS-CoV non-structural protein   PDB  2jzd
 247   388820   29837497   29837497   SARS-Tor2   SARS-CoV non-structural protein   PDB  2jwj
 248   355891   SARS024   29837497   SARS-Tor2   SARS-CoV non-structural protein   PDB  2idy
 249   355937   SARS070   29837500   SARS-Tor2   nonstructural Protein 7, Nsp7 replicase, PF08716 family   PDB  2kys
 250   367631   SARS166   29837497   SARS-Tor2   SARS-CoV non-structural protein   PDB  2acf
 251   367632   SARS167   NP_828860.2   SARS coronavirus   Nonstructural protein 1 (nsp1) from SARS coronavirus   PDB  2hsx
 252   396981   SARS168   NP_828850.1   SARS coronavirus   SARS protein, putative RNA binding protein.   PDB  2k87
 253   399745   SARS169   NP_828850.1   SARS coronavirus   SARS protein, putative RNA binding protein.   PDB  2kaf
 254   416489   SARS169   NP_828850.1   SARS coronavirus   SARS protein, putative RNA binding protein.   PDB  2kqw
 255   380043   FN12456A   SWOL_07JAN05_CONTIG119_REVISED_GENE619   S. wolfei str. Goettingen   FMN-binding protein   PDB  3in6
 256   391895   FR15089A   YP_753395.1   S. wolfei str. Goettingen   Putative antitoxin part of the bacterial toxin/antitoxin network [two domains: TTHA0281-like & YefM-like]   PDB  3k6q
 257   399241   MI9673AQ   YP_752756.1   S. wolfei str. Goettingen   Putative TetR-family transcriptional regulator   PDB  3lwj
 258   381737   PU9842C   YP_755085.1   S. wolfei str. Goettingen   Putative sulfurtransferase dsrE [DsrEF-like]   PDB  3pnx
 259   359588   16420133   16420133   S. typhimurium   putative methyltransferase [S-adenosyl-L-methionine-dependent methyltransferase]   PDB  2i6g
 260   358650   16423107   16423107   S. typhimurium   Putative glucosamine-fructose-6-phosphate aminotransferase.   PDB  2a3n
 261   371240   FK9279A   NP_463296.1   S. typhimurium   putative xylose isomerase-like protein   PDB  2q02
 262   391508   MG10938D   NP_459564.1   S. typhimurium   Putative phosphosugar isomerase. It is functionally associated with enzymes from the fructose and mannose metabolism.   PDB  3fkj
 263   391498   MG11417G   NP_462565.1   S. typhimurium   Valine-pyruvate aminotransferase AvtA.   PDB  3g7q
 264   391509   MG14656A   NP_459565.1   S. typhimurium   Putative phospho-sugar binding protein [SIS-domain]   PDB  3knz
 265   374979   PC06249B   16421009   S. typhimurium   Ethanolamine utilization protein eutQ   PDB  2pyt
 266   373908   PC06845C   16422983   S. typhimurium   Uncharacterized IolB-like protein   PDB  2qjv
 267   367043   FG7459A   SSUI_28JUL04_CONTIG203_REVISED_GENE585   S. suis 89-1591   Pyridoxamine 5'-phosphate oxidase-related   PDB  2hhz
 268   371505   FK4430A   YP_001201006.1   S. suis 89-1591   ADP-ribose pyrophosphatase   PDB  3o8s
 269   378153   FM11809A   SSUI_28JUL04_CONTIG175_REVISED_GENE346   S. suis 89-1591   Putative multiple antibiotic-resistance repressor (MarR).   PDB  3bdd
 270   380027   FN12429A   SSUI_28JUL04_CONTIG259_REVISED_GENE1367   S. suis 89-1591   GCN5-related N-acetyltransferase-like protein (ZP_00874857). This protein is encoded in the conserved genomic neighborhood of Holliday junction DNA helicase RuvB.   PDB  3g3s
 271   391485   MG14575E   SSUI_28JUL04_CONTIG216_REVISED_GENE695   S. suis 89-1591   PLP-dependent aminotransferase, lysine covalently bound to PLP.   PDB  3p6k
 272   359645   13814777   13814777   S. solfataricus   Archaeal ATPase from PFAM family PF01637   PDB  2fna
 273   359654   13815598   13815598   S. solfataricus   Putative thioesterase   PDB  2gf6
 274   358101   13815834   13815834   S. solfataricus   Proteins that adopts a YbjQ-like fold with unknown function [YjbQ-like]   PDB  1vph
 275   358109   13816655   13816655   S. solfataricus   MazG nucleotide pyrophosphohydrolase   PDB  1vmg
 276   375699   FL10866A   NP_343859.1   S. solfataricus   putative lipase   PDB  2rau
 277   376189   FL10904A   NP_343586.1   S. solfataricus   Putative TenA-like thiaminase [Heme oxygenase-like]   PDB  2qzc
 278   376473   FL11223A   NP_343093.1   S. solfataricus   putative nucleotidyltransferase   PDB  2rff
 279   377813   FM11532A   NP_342759.1   S. solfataricus   Ring oxydation complex/ phenylacetic acid degradation-like protein, phenylacetic acid catabolic protein, PF05138 family   PDB  4mud
 280   380014   FN0829A   NP_344512.1   S. solfataricus   CBS domain-containing protein in complex with AMP.   PDB  3ddj
 281   394448   MH11107A   NP_344022.1   S. solfataricus   TENA/THI-4 domain-containing protein, two domains protein, N-terminal is prokaryotic zinc finger domain and C-terminal is TENA_THI-4 domain (PF03070)   PDB  4lqx
 282   361217   PC01796D   13815350   S. solfataricus   Rubredoxin-like Zn chelating protein with unknown function from the DUF35 family   PDB  2gnr
 283   372180   PG9933A   NP_342590.1   S. solfataricus   Putative sulfur oxidation protein belongs to DsrE/DsrF-like family [DsrEF-like].   PDB  2qs7
 284   381769   PU12822A   NP_342589.1   S. solfataricus   DsrE/DsrF-like family protein [DsrEF-like]   PDB  3mc3
 285   399539   MI15954C   NP_268878.1   S. pyogenes   PTS dependent N-acetyl-galactosamine-IIB component [PTS IIb component]   PDB  3p3v
 286   391458   MG14652A   YP_001182657.1   S. putrefaciens CN-32   Putative SnoaL-like polyketide cyclase   PDB  3gzb
 287   361165   PC04954E   YP_001181611.1   S. putrefaciens CN-32   Siderophore-interacting protein   PDB  2gpj
 288   396500   PX6706A   YP_001181608.1   S. putrefaciens CN-32   Putative phosphatase (DUF442), related to JCSG structure 2f46   PDB  3gxh
 289   377915   FM11616A   YP_167254.1   S. pomeroyi DSS-3   Putative methyltranferase [Rossman fold]   PDB  3cvo
 290   383110   FP10366A   YP_165628.1   S. pomeroyi DSS-3   Protein of unknown function (DUF1989/COG3665) with complex topology and detectable structural similarity to concanavalin A-like lectins/glucanases.   PDB  3di4
 291   392348   FR15172B   YP_165822.1   S. pomeroyi DSS-3   The gene SPO0562 from Silicibacter pomeroyi dss-3 encodes a protein which is likely a methytransferase.   PDB  3iht
 292   391424   MG0148N   YP_167080.1   S. pomeroyi DSS-3   Putative phosphosugar isomerase. Homolog of glutamine-fructose-6-phosphate transaminases (isomerizing).   PDB  3fj1
 293   391453   MG10808L   YP_165150.1   S. pomeroyi DSS-3   Putative cyclic nucleotide-binding protein.   PDB  3h3z
 294   391435   MG14518G   YP_168589.1   S. pomeroyi DSS-3   Uncharacterized protein conserved in bacteria with a cystatin-like fold.   PDB  3flj
 295   391417   MG14647A   YP_166335.1   S. pomeroyi DSS-3   NTF-2 like protein of unknown function. This protein is encoded in the genomic neighborhood of a choline sulfatase [betC-1].   PDB  3fka
 296   391426   MG14649A   YP_167536.1   S. pomeroyi DSS-3   Putative antibiotic biosynthesis monooxygenase [Dimeric alpha+beta barrel]   PDB  3fgv
 297   391429   MG6567B   YP_168127.1   S. pomeroyi DSS-3   sugar phosphate isomerase from a cupin superfamily SPO2919 from Silicibacter pomeroy   PDB  3i7d
 298   394627   MH7542A   YP_165505.1   S. pomeroyi DSS-3   Putative glycerophosphoryl diester phosphodiesterase   PDB  3l12
 299   374753   PJ05853H   YP_164873.1   S. pomeroyi DSS-3   Protein of unknown function [TIM beta/alpha-barrel] that belongs to DUF849 family.   PDB  3chv
 300   374584   PJ06684A   YP_166079.1   S. pomeroyi DSS-3   Bacterial protein from DUF1185 with a chorismate mutase-like fold and sequence homology to a peptide synthase   PDB  2qtp
 301   374660   PJ06938A   YP_165412.1   S. pomeroyi DSS-3   Protein with unknown function which belongs to Pfam DUF1285 family   PDB  2re3
 302   358040   14972639   NP_345629.1   S. pneumoniae TIGR4   putative lipoate-protein ligase A [Class II aaRS and biotin synthetases, SufE/NifU]   PDB  1vqz
 303   391414   MG14470E   NP_344614.1   S. pneumoniae TIGR4   putative tagatose-6-phosphate ketose/aldose isomerase   PDB  3i0z
 304   358603   NP_344555.1   NP_344555.1   S. pneumoniae TIGR4   DNA polymerase III, beta chain (EC   PDB  2awa
 305   430698   NP_346487.1   NP_346487.1   S. pneumoniae TIGR4   Hydrolase from haloacid dehalogenase-like family   PDB  2mu2
 306   359637   NP_346487.1   NP_346487.1   S. pneumoniae TIGR4   Hydrolase from haloacid dehalogenase-like family   PDB  2go7
 307   430697   NP_346487.1   NP_346487.1   S. pneumoniae TIGR4   Hydrolase from haloacid dehalogenase-like family   PDB  2mu1
 308   366227   PD01933D   NP_346012.1   S. pneumoniae TIGR4   Putative 2-phospho-(L)-lactate transferase [alpha/beta class]   PDB  2q7x
 309   374659   PJ06042C   NP_344798.1   S. pneumoniae TIGR4   NMR structure of DUF925 family protein, PF06042 family, nucleotidyltransferase   PDB  2la3
 310   389882   PK10409D   NP_345429.1   S. pneumoniae TIGR4   Multidomain protein with S1 RNA-binding domains and winged helix DNA binding domain.   PDB  3go5
 311   417529   SP1264D   NP_346504.1   S. pneumoniae TIGR4   Phosphate ABC transporter, phosphate-binding protein, periplasmic binding protein, PF12849 family   PDB  4h1x
 312   417515   SP18142A   NP_346007.1   S. pneumoniae TIGR4   YbbR-like protein,the target has two YbbR domains, PF07949 family   PDB  4qdy
 313   417532   SP18154A   NP_346208.1   S. pneumoniae TIGR4   Conserved domain protein, DUF4649, PF15507 family protein   PDB  4iaj
 314   417534   SP18156A   NP_346341.1   S. pneumoniae TIGR4   NMR structure of DUF4651 family protein, PF15513 family   PDB  2m7o
 315   417539   SP18161A   NP_344732.1   S. pneumoniae TIGR4   NMR structure of YehR-like protein, PF06998 family, DUF1307   PDB  2mvb
 316   358745   NP_358222.1   NP_358222.1   S. pneumoniae R6   Putative transcriptional regulator from TenA family   PDB  2a6b
 317   371708   FK9452E   NP_717567.1   S. oneidensis   Putative endoribonuclease [Bacillus chorismate mutase-like]   PDB  2otm
 318   378232   FM11876A   NP_715767.1   S. oneidensis   NTF-2 like protein of unknown function [NTF2-like]   PDB  3b7c
 319   379975   FN10833A   NP_718593.1   S. oneidensis   IroE-like serine hydrolase   PDB  3gff
 320   394266   MH0298L   NP_718042.1   S. oneidensis   The gene NP_718042.1 from Shewanella oneidensis likely encodes an apo-form of a NADP reductase.   PDB  3goh
 321   394170   MH11753G   NP_719446.1   S. oneidensis   Putative CheC-like protein involved in bacterial chemotaxis   PDB  3h2d
 322   398694   MI15887P   NP_718175.1   S. oneidensis   Putative oxygenase [Double-stranded beta-helix]   PDB  3on7
 323   424983   NB7890A   NP_783526.1   S. oneidensis   NMR structure of DUF3144 family protein, PF11342   PDB  2lyy
 324   365930   PC04170E   NP_718719.1   S. oneidensis   Putative lipoprotein   PDB  3lhn
 325   360890   PC04261E   NP_716371.1   S. oneidensis   putative dye-decolorizing peroxidase [Ferredoxin-like]   PDB  2iiz
 326   366232   PD01865F   NP_719307.1   S. oneidensis   Putative PhoU-like phosphate regulatory protein from DUF47 family   PDB  2olt
 327   372361   PG9878A   NP_717203.1   S. oneidensis   Protein with unknown function which belongs to Pfam DUF3224 family.   PDB  2ooj
 328   376495   PJ02661S   NP_719793.1   S. oneidensis   Fic (Filamentation Induced by cAMP) family protein SO4266.   PDB  2qc0
 329   358002   24377463   SMU.1085   S. mutans   Peptide chain release factor 1 (RF-1).   PDB  1zbt
 330   390321   GS13262A   NP_721579.1   S. mutans   Putative beta-lactamase inhibitor protein.   PDB  3d4e
 331   394846   MG0383U   NP_720799.1   S. mutans   Nitroreductase-like protein [FMN-dependent nitroreductase-like]   PDB  3gag
 332   417498   SP17422O   NP_722245.1   S. mutans   Putative membrane lipoprotein, methionine-bindning, NLPA lipoprotein, PF03180 family   PDB  4q5t
 333   423098   CP20730C   NP_436101.1   S. meliloti 1021   Putative CpaE2 pilus assembly protein, response regulator receiver domain, PF00072   PDB  4myr
 334   403543   MJ10610B   NP_435675.1   S. meliloti 1021   Putative oxidoreductase, FMN-binding split barrel, Nudix   PDB  3rh7
 335   403636   MJ9307D   NP_384335.1   S. meliloti 1021   histidine triad (HIT) protein   PDB  3nrd
 336   403584   MJ9481B   NP_384228.1   S. meliloti 1021   Sugar isomerase   PDB  3qc0
 337   405915   TT1668C   NP_385823.1   S. meliloti 1021   Putative transcription regulator   PDB  3pjy
 338   375055   FB10613B   YP_750721.1   S. frigidimarina NCIMB 400   Putative flavin reductase with split barrel domain. It may be part of a two-component enzyme system, composed of a flavin reductase and an oxidase, which uses the reduced flavin to hydroxylate substrates.   PDB  3fge
 339   387127   FK6177B   YP_752209.1   S. frigidimarina NCIMB 400   Domain of Unknown Function with a Cupin Fold   PDB  3d82
 340   371790   FK9784A   YP_751781.1   S. frigidimarina NCIMB 400   Protein from the superfamily of RmlC-like cupins (Double-stranded beta-helix fold)   PDB  2pfw
 341   378123   FM11786A   YP_750657.1   S. frigidimarina NCIMB 400   Genomic neighborhood of the putative ketosteroid isomerase (YP_750657.1) is enriched in genes encoding proteins involved in copper resistance.   PDB  3bb9
 342   375169   HP10632F   YP_749235.1   S. frigidimarina NCIMB 400   Putative succinylglutamate desuccinylase/aspartoacylase   PDB  3lwu
 343   372476   PG9822D   YP_749275.1   S. frigidimarina NCIMB 400   Bacterial protein from DUF3478; putative role as universal stress protein   PDB  2ook
 344   374311   PJ04820A   YP_750003.1   S. frigidimarina NCIMB 400   tryptophan halogenase   PDB  2pyx
 345   381550   PU8575B   YP_751971.1   S. frigidimarina NCIMB 400   Putative hydrolase   PDB  3lho
 346   376319   FL11068A   NP_764060.1   S. epidermidis ATCC 12228   Deoxyribonucleotidase-like protein is also similar to histidinol phosphatase. The predicted catalytic residues: Asp9 and Asp11. Genomic neighborhood and phylogenetic cooccurrence indicate functional association with choline transport, histidine metabolism and nitric-oxide synthesis.   PDB  3bwv
 347   391352   MG0383T   NP_765521.1   S. epidermidis ATCC 12228   Putative NAD(P)H:FMN oxidoreductase [FMN-dependent nitroreductase-like]   PDB  3gbh
 348   394358   MH10870A   NP_765248.1   S. epidermidis ATCC 12228   putative thiaminase II   PDB  3no6
 349   366230   PD01933E   NP_764104.1   S. epidermidis ATCC 12228   Putative phosphotransferase   PDB  2ppv
 350   370140   FJ9110A   YP_564736.1   S. denitrificans OS-217   Domain of Unknown Function with a Heme Oxygenase-like Fold   PDB  3dde
 351   375163   HP10629G   YP_562911.1   S. denitrificans OS-217   Putative carboxypeptidase A   PDB  3l2n
 352   375165   HP10645E   YP_563529.1   S. denitrificans OS-217   Carboxypeptidases, desuccinylases, aspartoacylases and uncharacterized protein YP_563529.1 are similar to each other and belong to metallopeptidases containing co-catalytic metalloactive sites.   PDB  3b2y
 353   391339   MG0148K   YP_563707.1   S. denitrificans OS-217   Putative phosphosugar isomerase (SIS domain fold)   PDB  3hba
 354   394060   MH0111B   YP_563138.1   S. denitrificans OS-217   Putative alcohol dehydrogenase   PDB  3rf7
 355   368328   PE00238G   YP_561575.1   S. denitrificans OS-217   DNA damage-inducible protein from the DinB family   PDB  2oqm
 356   372600   PG9969A   YP_563039.1   S. denitrificans OS-217   Bacterial protein from DUF3224 with an AOC barrel-like fold   PDB  2q03
 357   396443   PX14652B   SDEN_20JUL04_CONTIG92_REVISED_GENE3346   S. denitrificans OS-217   Putative SnoaL-like polyketide cyclase   PDB  3lza
 358   354901   YDR428C   YDR428C   S. cerevisiae   Putative serine hydrolase, D9461.15P.   PDB  1vkh
 359   354980   YEL038W   YEL038W   S. cerevisiae   UTR4 protein (Unknown transcript 4 protein).   PDB  2g80
 360   355004   YFR010W   YFR010W   S. cerevisiae   Ubiquitin carboxyl-terminal hydrolase 6 (EC (Ubiquitin thiolesterase 6) (Ubiquitin-specific processing protease 6) (Deubiquitinating enzyme 6).   PDB  1vjv
 361   355059   YIR029W   YIR029W   S. cerevisiae   Allantoicase (EC (Allantoate amidinohydrolase).   PDB  1o59
 362   354135   YOR209C   YOR209C   S. cerevisiae   Putative nicotinate phosphoribosyltransferase (NAPRTase).   PDB  1vlp
 363   354122   YOR323C   YOR323C   S. cerevisiae   Gamma-glutamyl phosphate reductase (GPR) (EC (Glutamate-5- semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase).   PDB  1vlu
 364   375054   FB10609B   YP_001049024.1   S. baltica OS155   FMN-binding domain of a flavin reductase-like enzyme [Split barrel-like]   PDB  3hmz
 365   378217   FM11862A   YP_001049020.1   S. baltica OS155   NTF2-like protein of unknown function.   PDB  3blz
 366   378293   FM11978A   YP_001048502.1   S. baltica OS155   Putative PII-like nitrogen regulatory protein   PDB  3ce8
 367   383464   FP4102A   YP_001051978.1   S. baltica OS155   Putative oxygenase.   PDB  3dkq
 368   375157   HP10645C   YP_001051774.1   S. baltica OS155   Putative Zn-peptidase   PDB  3ieh
 369   398981   MI4130F   YP_001050605.1   S. baltica OS155   6-phosphogluconolactonase   PDB  3nwp
 370   380281   PC06938B   YP_001050848.1   S. baltica OS155   Protein from DUF1285 with a PH-like fold   PDB  2ra9
 371   374572   PJ04222C   YP_001051499.1   S. baltica OS155   Protein of unknown function from DUF416   PDB  2q9r
 372   367003   FG7419A   NP_828636.1   S. avermitilis MA-4680   protein with FMN-binding split barrel fold   PDB  2iab
 373   378018   FM11705A   NP_825848.1   S. avermitilis MA-4680   Putative dehydratase from the NTF2-like family   PDB  3cnx
 374   379891   FN9673K   NP_821317.1   S. avermitilis MA-4680   Putative TetR-transcriptional regulator [multidomain all alpha protein]   PDB  3jsj
 375   381519   PU6739A   NP_823353.1   S. avermitilis MA-4680   Rossmann-fold protein of unknown function (DUF574)[S-adenosyl-L-methionine-dependent methyltransferases].   PDB  3go4
 376   423872   C.KS0869A   NP_371288.1   S. aureus Mu50   Thioredoxine reductase, FAD/NAD-linked reductases, Pyr_redox_2 family   PDB  4gcm
 377   378017   FM11704A   NP_371943.1   S. aureus Mu50   Putative acetyltransferase (acyl-CoA N-acyltransferase fold)   PDB  3h4q
 378   379875   FN9546A   NP_373092.1   S. aureus Mu50   Acetyltransferase of GNAT family, where Tyr129 is predicted as the catalytic residue.   PDB  3d8p
 379   382610   FP10572B   NP_373108.1   S. aureus Mu50   Flavin-containing putative monooxygenase (FAD/NAD(P)-binding domain fold)   PDB  3d1c
 380   375153   HP2219D   NP_372036.1   S. aureus Mu50   Tripeptidase   PDB  3rza
 381   399559   MI15962B   NP_372959.1   S. aureus Mu50   Putative bacterial transcription activator   PDB  3lur
 382   417440   SP17980D   NP_370957.1   S. aureus Mu50   superantigen-like protein   PDB  3o13
 383   421044   SP17984B   NP_372010.1   S. aureus Mu50   DUF1672 family protein, PF07901 family protein, DUF1672, unique fold: kinked-helix-beta-beta-beta repeat   PDB  4qpv
 384   417453   SP18049A   NP_371642.1   S. aureus Mu50   Cysteine-rich secretory protein, CAP protein family   PDB  4h0a
 385   417464   SP18127A   NP_370827.1   S. aureus Mu50   DUF4467 family protein, PF14729, secreted protein   PDB  4ebg
 386   417470   SP18371B   NP_372339.1   S. aureus Mu50   Probable beta-lactamase, PF16229 family, DUF4888.   PDB  2mqb
 387   417490   SP18390A   NP_372322.1   S. aureus Mu50   DUF4909 family protein, streptavidin-like PF16253 family   PDB  4lqz
 388   417449   SP5305Y   NP_370924.1   S. aureus Mu50    Similar to lipoprotein, NLP/P60 family, Slt/lysozyme-like muramidase, NlpC/P60 LD endopeptidase   PDB  4fdy
 389   358652   NP_645455.1   NP_645455.1   S. aureus MW2   putative acetyltransferase from GNAT family   PDB  2aj6
 390   374925   NP_646154.1   NP_646154.1   S. aureus MW2   Bacterial domain of unknown function (DUF1798) [four-helical bundle fold]   PDB  2ets
 391   400661   FR14737F   YP_928783.1   S. amazonensis SB2B   Protein with unknown function which belongs to Pfam DUF2131 family ["Winged helix" DNA-binding domain].   PDB  3ke2
 392   375151   HP10632E   YP_926482.1   S. amazonensis SB2B   Putative succinylglutamate desuccinylase / aspartoacylase.   PDB  3fmc
 393   375152   HP10645A   YP_926603.1   S. amazonensis SB2B   Putative metallopeptidase   PDB  2qvp
 394   394107   MH7531D   YP_929327.1   S. amazonensis SB2B   Putative phosphohydrolase   PDB  3m1t
 395   394288   MH7544A   YP_926882.1   S. amazonensis SB2B   Putative metal-dependent phosphohydrolase   PDB  3i7a
 396   398935   MI15755X   YP_929127.1   S. amazonensis SB2B   UROPORPHYRINOGEN-III SYNTHASE [HemD-like]   PDB  3mw8
 397   399142   MI9673AA   YP_925981.1   S. amazonensis SB2B   TetR-like transcriptional regulator, DNA/RNA-binding 3-helical bundle fold   PDB  3rh2
 398   396931   NT12250A   SAMA_14OCT04_CONTIG53_REVISED_GENE1514   S. amazonensis SB2B   Putative DNA replication regulator Hda is likely to be a CTPase.   PDB  3sc3
 399   378832   NT12250A   SAMA_14OCT04_CONTIG53_REVISED_GENE1514   S. amazonensis SB2B   Putative DNA replication regulator Hda is likely to be a CTPase.   PDB  3bos
 400   373751   PH10070D   YP_928494.1   S. amazonensis SB2B   Sama_2622 adopting a new all alpha fold; putative ferritin-like protein   PDB  2pv4
 401   373679   PH10197A   YP_926445.1   S. amazonensis SB2B   DUF4144 family protein, the first structural representative of PF13642 family   PDB  2l6o
 402   381783   PU6399C   YP_926556.1   S. amazonensis SB2B   Bacterial pleckstrin homology domain   PDB  3hsa
 403   396409   PX8928B   YP_926796.1   S. amazonensis SB2B   Peptidase M28 precursor.   PDB  3iib
 404   370306   FJ1648A   NP_688652.1   S. agalactiae 2603   putative metal dependent phosphohydrolase   PDB  2ogi
 405   370427   FJ9546A   NP_689019.1   S. agalactiae 2603   acetyltransferase   PDB  2q7b
 406   371586   FK9742A   NP_688560.1   S. agalactiae 2603   acetyltransferase GNAT family   PDB  2pc1
 407   379820   FN9768A   YP_461911.1   S. aciditrophicus SB   Putative thioesterase (thioesterase/thiol ester dehydrase-isomerase fold)   PDB  3hdu
 408   383639   FP7651A   YP_460196.1   S. aciditrophicus SB   Putative tungsten formylmethanofuran dehydrogenase subunit E (FmdE) [FwdE/GAPDH domain-like]   PDB  3d00
 409   392645   FR14824A   YP_461806.1   S. aciditrophicus SB   Putative molybdenum carrier protein [MCP/YpsA-like]   PDB  3imk
 410   399109   MI9663A   YP_461098.1   S. aciditrophicus SB   Putative transcriptional regulator of the TetR family   PDB  3s5r
 411   416854   SP0409AA   ZP_02041710.1   Ruminococcus gnavus ATCC 29149   putative glycyl-glycine endopeptidase lytM   PDB  3nyy
 412   416850   SP1554B   ZP_02041731.1   Ruminococcus gnavus ATCC 29149   DUF1312 family protein, PF07009   PDB  4esn
 413   416853   SP17422C   ZP_02040096.1   Ruminococcus gnavus ATCC 29149   Putative lipoprotein, putative methionine - bindning, NLPA lipoprotein, PF03180 family   PDB  4ib2
 414   417401   SP17834A   ZP_02041626.1   Ruminococcus gnavus ATCC 29149   Cystatin-like protein, divergent member of NTF2-like superfamily   PDB  4qan
 415   417402   SP17835A   ZP_02040384.1   Ruminococcus gnavus ATCC 29149   DUF5037 family protein, PF16440 family, new fold   PDB  4gl6
 416   417405   SP17944A   ZP_02041089.1   Ruminococcus gnavus ATCC 29149   DUF3887 family protein, PF13026, NTF2-like fold   PDB  2mc8
 417   417406   SP17945A   ZP_02042476.1   Ruminococcus gnavus ATCC 29149   NMR structure of the protein ZP_02042476.1   PDB  2mct
 418   417407   SP17946A   ZP_02040092.1   Ruminococcus gnavus ATCC 29149   Putative metal binding protein RUMGNA_00854   PDB  3u7z
 419   417426   SP17965A   ZP_02040151.1   Ruminococcus gnavus ATCC 29149   putative peptide binding protein   PDB  3noh
 420   403422   MJ14530B   YP_354942.1   Rhodobacter sphaeroides 2.4.1   aspartate aminotransferase   PDB  3nra
 421   376596   PS04248   YP_001042567.1   R. sphaeroides atcc 17029   Protein of unknown function (DUF427)   PDB  3djm
 422   370502   FJ5490A   YP_425393.1   R. rubrum ATCC 11170   Alkylhydroperoxidase AhpD core   PDB  2ouw
 423   378192   FM11842A   YP_427473.1   R. rubrum ATCC 11170   NTF2-like protein of unknown function in nutrient uptake.   PDB  3fsd
 424   379808   FN9673I   YP_425770.1   R. rubrum ATCC 11170   Transcriptional regulator of TetR family (YP_425770) and proteins with putative antimicrobial activity are encoded by neighboring genes.   PDB  3cwr
 425   383760   FP6436A   YP_428290.1   R. rubrum ATCC 11170   An alpha-helical protein of unknown function (Pfam01724). It is in genomic neighborhood of rnhB (Ribonuclease HII).   PDB  3fcn
 426   391960   FR15129A   YP_427503.1   R. rubrum ATCC 11170   Protein with unknown function from DUF3532 family   PDB  3k8r
 427   394507   MH15467A   YP_426450.1   R. rubrum ATCC 11170   Putative xylose isomerase   PDB  3qxb
 428   403519   MJ15949E   NP_949368.1   R. palustris CGA009   formyltetrahydrofolate deformylase   PDB  3obi
 429   403484   MJ3134L   NP_946427.1   R. palustris CGA009   Putative dehydrogenase [FAD-binding/transporter-associated domain-like, Ferredoxin-like]   PDB  3pm9
 430   403456   MJ3193C   NP_947670.1   R. palustris CGA009   Putative acetylornithine deacetylase, phosphorylase/hydrolase-like   PDB  3pfo
 431   405167   TT16411A   NP_949733.1   R. palustris CGA009   ABC-type branched-chain amino acid transporter   PDB  3n0x
 432   403814   PT06249A   YP_766765.1   R. leguminosarum bv. viciae 3841   EutQ-like protein with a cupin fold   PDB  3lwc
 433   387040   EK5976M   YP_295230.1   R. eutropha JMP134   Putative aminoglycoside phosphotransferase.   PDB  3dxp
 434   366988   FG7406A   YP_295714.1   R. eutropha JMP134   putative 4-methylmuconolactone methylisomerase   PDB  2ifx
 435   380353   FG7408A   YP_298765.1   R. eutropha JMP134   Protein with a cupin-like fold and unknown function.   PDB  3cjx
 436   381874   FG7410A   YP_299883.1   R. eutropha JMP134   EthD-like protein [Ferredoxin-like]   PDB  3bf4
 437   370263   FJ5490C   YP_296737.1   R. eutropha JMP134   alkylhydroperoxidase AhpD core: uncharacterized peroxidase-related protein   PDB  2prr
 438   370563   FJ8891A   YP_298295.1   R. eutropha JMP134   Putative transcriptional regulator/DNA-binding protein   PDB  2obp
 439   370429   FJ9548A   YP_298971.1   R. eutropha JMP134   Putative thioesterase, phenylacetic acid degradation-related protein [PaaI/YdiI-like].   PDB  2pim
 440   371684   FK5955B   YP_294607.1   R. eutropha JMP134   RmlC-like cupin with unknown function   PDB  3ebr
 441   371710   FK8801A   YP_295895.1   R. eutropha JMP134   GCN5-related N-acetyltransferase   PDB  2q0y
 442   371797   FK8817C   YP_295660.1   R. eutropha JMP134   Putative mannose-6-phosphate isomerase   PDB  2opk
 443   376637   FL11003A   YP_299159.1   R. eutropha JMP134   The gene Reut_B4967 from Ralstonia eutropha jmp134 encodes a putative ketopantonoate reductase   PDB  3hwr
 444   377866   FM11573B   YP_295234.1   R. eutropha JMP134   Putative glutathione S-transferase [Thioredoxin, GST C-terminal domain-like]   PDB  3cbu
 445   377390   FM12049A   YP_299179.1   R. eutropha JMP134   Putative glycosyl hydrolase with BNR repeat [7-bladed beta-propeller]   PDB  3b7f
 446   379793   FN7456B   YP_296387.1   R. eutropha JMP134   Thioesterase [Thioesterase/thiol ester dehydrase-isomerase fold]   PDB  3ck1
 447   383474   FP9641B   YP_298823.1   R. eutropha JMP134   Putative transcriptional regulator GntR   PDB  3ihu
 448   391227   MG14503Q   YP_297314.1   R. eutropha JMP134   Histidinol-phosphate aminotransferase.   PDB  3euc
 449   391247   MG14627A   YP_298287.1   R. eutropha JMP134   Putative biosynthetic protein with RmlC-like cupin fold.   PDB  3fjs
 450   391221   MG8761L   YP_295443.1   R. eutropha JMP134   The sequence YP_295443.1 from Ralstonia eutropha jmp134 corresponds to an enzyme from a family of nitroreductases.   PDB  3hj9
 451   394240   MH10766D   YP_296108.1   R. eutropha JMP134   The gene ID YP_296108.1 from Ralstonia eutropha jmp134 encodes a putative NADPH:quinone oxidoreductase.   PDB  3iup
 452   394332   MH10855A   YP_298327.1   R. eutropha JMP134   Fe-dependent alcohol dehydrogenase [two domains: Rossman-like and all alpha class]   PDB  3jzd
 453   397820   MI12113D   YP_298346.1   R. eutropha JMP134   Putative lyase, TIM beta/alpha-barrel   PDB  3qqw
 454   360840   PC05853B   YP_295841.1   R. eutropha JMP134   Protein with unknown function which belongs to Pfam DUF849 family.   PDB  3no5
 455   361076   PC05995D   YP_299237.1   R. eutropha JMP134   Putative cysteine dioxygenase type I   PDB  2gm6
 456   374214   PJ05013D   YP_297560.1   R. eutropha JMP134   N-formylglutamate amidohydrolase (phosphorylase/hydrolase-like fold)   PDB  2q7s
 457   389767   PK6406E   YP_297411.1   R. eutropha JMP134   Phenylacetate-CoA oxygenase subunit PaaB   PDB  3egr
 458   381418   PU6423S   YP_293392.1   R. eutropha JMP134   Putative 3-keto-5-aminohexanoate cleavage enzyme from DUF849 (PF05853) [TIM beta/alpha-barrel]   PDB  3c6c
 459   381263   PU8575A   YP_299723.1   R. eutropha JMP134   The sequence YP_299723.1 from Ralstonia eutropha jmp134 encodes a putative metal hydrolase.   PDB  3iuz
 460   396389   PX15607B   YP_299413.1   R. eutropha JMP134   Putative DNA-binding protein from DUF296.   PDB  3hwu
 461   403252   MJ11245A   NP_791563.1   Pseudomonas syringae pv. tomato str. DC3000   TenA homolog   PDB  3oql